WDCM training course: the INSDC & genome anntation

Materials:

  1. DDBJ https://www.ddbj.nig.ac.jp
  2. The INSDC http://www.insdc.org
  3. GenBank https://www.ncbi.nlm.nih.gov/genbank/
  4. ENA https://www.ebi.ac.uk/ena

  5. 1000 Genomes (IGSR) http://www.internationalgenome.org
  6. 1001 Genomes http://1001genomes.org
  7. 3k Rice Genomes http://iric.irri.org/resources/3000-genomes-project
  8. UK10K http://www.uk10k.org
  9. GGBN http://www.ggbn.org
  10. DivSeek http://www.divseek.org
  11. JGI GOLD DB https://gold.jgi.doe.gov
  12. SRA growth https://www.ncbi.nlm.nih.gov/sra/docs/sragrowth
  13. DNA sequencing cost http://www.genome.gov/sequencingcosts/

  14. SRA in DDBJ https://www.ddbj.nig.ac.jp/dra/index.html
  15. BioProject in DDBJ https://www.ddbj.nig.ac.jp/bioproject/index-e.html
  16. BioSample in DDBJ https://www.ddbj.nig.ac.jp/biosample/index-e.html
  17. (Trad) DDBJ Data Submission https://www.ddbj.nig.ac.jp/ddbj/index-e.html
  18. The Genomic Standards Consortium (GSC) http://gensc.org

  19. NIG supercomputer https://sc.ddbj.nig.ac.jp/ja
  20. hardwares on the NIG sc https://sc2.ddbj.nig.ac.jp/index.php/systemconfig
  21. softwares on the NIG sc https://sc.ddbj.nig.ac.jp/ja/system-guide/software

  22. DFAST https://dfast.nig.ac.jphttps://essay-online.com/